Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954345.1_cds_XP_016493243.1_83375
CDS Infomation

[gene=LOC107812614] [db_xref=GeneID:107812614] [protein=granule-bound starch synthase 2, chloroplastic/amyloplastic-like] [protein_id=XP_016493243.1] [location=complement(join(51248..52204,53384..53578,53723..53833,54274..54338,55647..56289,56881..57180))] [gbkey=CDS]
Sequence

ATGGAAAATTGCACTCTTCTTCATAGTGGAAATCAATTCCAGCCCAAGTTTCCTTTCTTT
GCACTTAAGCCCAAAAAGTTTCCTTTTTTTGTAGTTGGGTGTTCTAGAGTTTTGGGTGAA
GATATAGTCAAGTTATCTATAGCTCATGGCTCCAGCAGAGAGCAAATGTGGAGGATTAAA
GCCACAGGAAAAAACTCTGGGGAAGCTACAAATATAGATGATGAATCGGATGATGCTTTA
CAGGCTACAATTGAAAAGAGCAAAAAGGTGTTAGCCATGCAAAAGGACCTACTTCAACAG
ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGCCTTGAAGATGCCAAAGGT
ACTTATGACAACGGAAATGGTAGCTTATCAAATGTTGATGTCCGTGGCGTGGATAAAGAC
TATAATAGTACTTTACCTAGTACTGCTACTCCGCCAATTGTTGATGACCTGAAAAATACA
CCGGCAGCTAGAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTTAAAAGGGACCTAGCT
CAGGAAAGGCAGTCGAAAACAGCTCAATCCGATGAAAGGGCTACCCCACTGTCAAGATCA
TCTGTCACACCCAGTCATCAGACTTCCTCTACCGTAAGTTCTGCCAAAAGAACATTATAT
GTCCCTCCAGAAACTCCAAAGTTCAATCAAGAGACAGGCAAAACTTTTGTCGACATTCCT
GGAAAGAAGATCCAGTCTGATGTGCCTTCATTATTTAAAGAATCCTCAGCACAATCCTAC
ATGGAACAGAAGAGTGAAAATTTTGAAGGATCAAGTGCTGAGAAGGCAAACATAGAGACT
GAAGACCCCGAGAATGTAGATGAGAAACCCCCTCCATTGGCAGGAACGAATGCTATGAAC
GTTATTTTGGTTGCTGCAGAATGCGCTCCATGGTCTAAAACAGGTGGACTTGGAGATGTA
GCTGGAGCATTACCCAAGGCTTTGGCTCGACGTGGCCACAGAGTTATGGTTGTGGCACCT
CGTTATGGCAACTATGCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTGAT
GGTCAGGTATGTTTGACTGCATTAATAAGATGTAGCTTTCATGTCTGTTGGCAATTTCAG
GTTCCTTGGCATGTGCCATGTGGTGGGGTCTGCTATGGAGATGGAAATTTAGTGTTTATT
GCTAATGATTGGCATACTGCTTTATTGCCAGTTTATCTGAAAGCTTATTATCGTGACAAT
GGAATGATGAAATATACAAGATCTCTCCTAGTCATTCATAACATCGCTCACCAGGGTCGT
GGTCCTTTGGATGATTTTTCATATGTAGATCTTCCACCACACTACATGGACATTTTCAGG
TTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCAGCTGGTCTAAAGACAGCG
GATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTAAAAACTTCCGAAGGCGGC
TGGGGATTGCACGAGATAATTAATGAGAATGATTGGAAATTCCGGGGTATTGTAAATGGG
ATTGATACAAAAGAGTGGAACCCTGAGTTGGATGTTCACTTAATGTCAGATGGTTACGTA
AACTATTCCCTGGACACACTGCAGACTGGCAAGCCTCAATGTAAATCTGCATTGCAGAAG
GAACTTGGTTTACCAGTTCGCGACGATGTCCCACTAATCGGTTTCATCGGGAGGCTTGAC
CCCCAAAAAGGCGTTGATGTGATAGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTA
CAACTGGTCATGTTAGGGACGGGTAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAG
TGCCAATACAATGATAAAATTAGAGGATGGGTTGGTTTCTCCGTGAAGACTGCTCATCGT
ATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAAC
CAGCTTTATGCGATGAAATACGGGACTATTCCTGTTGTTCATGCTGTAGGAGGACTTAAA
GATACTGTGCAGCCTTTTGATCCTTTTAATGAGTCGGGATTAGGATGGACCTTCAGTAGG
GCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTACTGACTTATCGCGAGTAC
AAACAGAGTTGGGAGGGGCTTCAGAGACGCGGTATGACACAAGACCTAAGTTGGGATAAT
GCTGCTCATAACTATGAGGAAGTTGTTGTTGCTGCTAAGTATCAGTGGTGA

Peptide Sequence

PEP ID

XP_016493243.1
PEP Infomation

PREDICTED: granule-bound starch synthase 2, chloroplastic/amyloplastic-like [Nicotiana tabacum]
Sequence

MENCTLLHSGNQFQPKFPFFALKPKKFPFFVVGCSRVLGEDIVKLSIAHGSSREQMWRIK
ATGKNSGEATNIDDESDDALQATIEKSKKVLAMQKDLLQQIAERRKVVSSIKSSLEDAKG
TYDNGNGSLSNVDVRGVDKDYNSTLPSTATPPIVDDLKNTPAARSQDFVESKREVKRDLA
QERQSKTAQSDERATPLSRSSVTPSHQTSSTVSSAKRTLYVPPETPKFNQETGKTFVDIP
GKKIQSDVPSLFKESSAQSYMEQKSENFEGSSAEKANIETEDPENVDEKPPPLAGTNAMN
VILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYGNYAEPQDSGVRKIYKVD
GQVCLTALIRCSFHVCWQFQVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDN
GMMKYTRSLLVIHNIAHQGRGPLDDFSYVDLPPHYMDIFRLYDPVGGEHFNIFAAGLKTA
DRVVTVSHGYSWELKTSEGGWGLHEIINENDWKFRGIVNGIDTKEWNPELDVHLMSDGYV
NYSLDTLQTGKPQCKSALQKELGLPVRDDVPLIGFIGRLDPQKGVDVIAEAVPWMMGQDV
QLVMLGTGRPDLEQMLRQFECQYNDKIRGWVGFSVKTAHRITAGADILLMPSRFEPCGLN
QLYAMKYGTIPVVHAVGGLKDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREY
KQSWEGLQRRGMTQDLSWDNAAHNYEEVVVAAKYQW

Transcript Sequence

Gene sequence data has not been registered.